NAPKON Pediatrics Module
1.0.0 - trial-use
NAPKON Pediatrics Module - Local Development build (v1.0.0). See the Directory of published versions
Defining URL: | https://www.napkon.de/fhir/StructureDefinition/specimen-excreta |
Version: | 1.0.0 |
Name: | SpecimenExcreta |
Title: | Specimen Excreta |
Status: | Active as of 2021-11-09 |
Definition: | Urine and Stool samples |
Publisher: | Charité - Universitätsmedizin Berlin |
Source Resource: | XML / JSON / Turtle |
The official URL for this profile is:
https://www.napkon.de/fhir/StructureDefinition/specimen-excreta
Parameter Case Report Form | FHIR Resource Attribute |
---|---|
Type of excreta | Specimen.type |
The following codes are from the v2-0487 Code System:
Response Option | Code |
---|---|
Stuhl | #STL "Stool = Fecal" |
Urin | #UR "Urine" |
This Specimen profile is used in conjunction with the SARS-CoV-2 RT PCR Specimen profile to specify the type of excreta that was collected from a patient and tested for SARS-CoV-2.
This profile of a FHIR Specimen is derived from the Specimen FHIR resource.
Description of Profiles, Differentials, Snapshots and how the different presentations work.
Name | Flags | Card. | Type | Description & Constraints![]() |
---|---|---|---|---|
![]() ![]() | 0..* | Specimen | Sample for analysis | |
![]() ![]() ![]() | Σ | 0..1 | string | Logical id of this artifact |
![]() ![]() ![]() | Σ | 0..1 | Meta | Metadata about the resource |
![]() ![]() ![]() | ?!Σ | 0..1 | uri | A set of rules under which this content was created |
![]() ![]() ![]() | 0..1 | code | Language of the resource content Binding: CommonLanguages (preferred) Max Binding: AllLanguages: A human language. | |
![]() ![]() ![]() | 0..1 | Narrative | Text summary of the resource, for human interpretation | |
![]() ![]() ![]() | 0..* | Resource | Contained, inline Resources | |
![]() ![]() ![]() | 0..* | Extension | Additional content defined by implementations | |
![]() ![]() ![]() | ?! | 0..* | Extension | Extensions that cannot be ignored |
![]() ![]() ![]() | Σ | 0..* | Identifier | External Identifier |
![]() ![]() ![]() | Σ | 0..1 | Identifier | Identifier assigned by the lab |
![]() ![]() ![]() | ?!Σ | 0..1 | code | available | unavailable | unsatisfactory | entered-in-error Binding: SpecimenStatus (required): Codes providing the status/availability of a specimen. |
![]() ![]() ![]() | SΣ | 1..1 | CodeableConcept | Kind of material that forms the specimen Binding: Excreta (required) |
![]() ![]() ![]() | SΣ | 1..1 | Reference(Patient) | A reference from one resource to another |
![]() ![]() ![]() | Σ | 0..1 | dateTime | The time when specimen was received for processing |
![]() ![]() ![]() | 0..* | Reference(Specimen) | Specimen from which this specimen originated | |
![]() ![]() ![]() | 0..* | Reference(ServiceRequest) | Why the specimen was collected | |
![]() ![]() ![]() | 0..1 | BackboneElement | Collection details | |
![]() ![]() ![]() ![]() | 0..1 | string | Unique id for inter-element referencing | |
![]() ![]() ![]() ![]() | 0..* | Extension | Additional content defined by implementations | |
![]() ![]() ![]() ![]() | ?!Σ | 0..* | Extension | Extensions that cannot be ignored even if unrecognized |
![]() ![]() ![]() ![]() | Σ | 0..1 | Reference(Practitioner | PractitionerRole) | Who collected the specimen |
![]() ![]() ![]() ![]() | Σ | 0..1 | Collection time | |
![]() ![]() ![]() ![]() ![]() | dateTime | |||
![]() ![]() ![]() ![]() ![]() | Period | |||
![]() ![]() ![]() ![]() | Σ | 0..1 | Duration | How long it took to collect specimen |
![]() ![]() ![]() ![]() | 0..1 | SimpleQuantity | The quantity of specimen collected | |
![]() ![]() ![]() ![]() | 0..1 | CodeableConcept | Technique used to perform collection Binding: FHIRSpecimenCollectionMethod (example): The technique that is used to perform the procedure. | |
![]() ![]() ![]() ![]() | 0..1 | CodeableConcept | Anatomical collection site Binding: SNOMEDCTBodyStructures (example): Codes describing anatomical locations. May include laterality. | |
![]() ![]() ![]() ![]() | Σ | 0..1 | Whether or how long patient abstained from food and/or drink Binding: hl7VS-relevantClincialInformation (extensible): Codes describing the fasting status of the patient. | |
![]() ![]() ![]() ![]() ![]() | CodeableConcept | |||
![]() ![]() ![]() ![]() ![]() | Duration | |||
![]() ![]() ![]() | 0..* | BackboneElement | Processing and processing step details | |
![]() ![]() ![]() ![]() | 0..1 | string | Unique id for inter-element referencing | |
![]() ![]() ![]() ![]() | 0..* | Extension | Additional content defined by implementations | |
![]() ![]() ![]() ![]() | ?!Σ | 0..* | Extension | Extensions that cannot be ignored even if unrecognized |
![]() ![]() ![]() ![]() | 0..1 | string | Textual description of procedure | |
![]() ![]() ![]() ![]() | 0..1 | CodeableConcept | Indicates the treatment step applied to the specimen Binding: SpecimenProcessingProcedure (example): Type indicating the technique used to process the specimen. | |
![]() ![]() ![]() ![]() | 0..* | Reference(Substance) | Material used in the processing step | |
![]() ![]() ![]() ![]() | 0..1 | Date and time of specimen processing | ||
![]() ![]() ![]() ![]() ![]() | dateTime | |||
![]() ![]() ![]() ![]() ![]() | Period | |||
![]() ![]() ![]() | 0..* | BackboneElement | Direct container of specimen (tube/slide, etc.) | |
![]() ![]() ![]() ![]() | 0..1 | string | Unique id for inter-element referencing | |
![]() ![]() ![]() ![]() | 0..* | Extension | Additional content defined by implementations | |
![]() ![]() ![]() ![]() | ?!Σ | 0..* | Extension | Extensions that cannot be ignored even if unrecognized |
![]() ![]() ![]() ![]() | Σ | 0..* | Identifier | Id for the container |
![]() ![]() ![]() ![]() | 0..1 | string | Textual description of the container | |
![]() ![]() ![]() ![]() | 0..1 | CodeableConcept | Kind of container directly associated with specimen Binding: SpecimenContainerType (example): Type of specimen container. | |
![]() ![]() ![]() ![]() | 0..1 | SimpleQuantity | Container volume or size | |
![]() ![]() ![]() ![]() | 0..1 | SimpleQuantity | Quantity of specimen within container | |
![]() ![]() ![]() ![]() | 0..1 | Additive associated with container Binding: hl7VS-additivePreservative (example): Substance added to specimen container. | ||
![]() ![]() ![]() ![]() ![]() | CodeableConcept | |||
![]() ![]() ![]() ![]() ![]() | Reference(Substance) | |||
![]() ![]() ![]() | Σ | 0..* | CodeableConcept | State of the specimen Binding: hl7VS-specimenCondition (extensible): Codes describing the state of the specimen. |
![]() ![]() ![]() | 0..* | Annotation | Comments | |
![]() |
Name | Flags | Card. | Type | Description & Constraints![]() |
---|---|---|---|---|
![]() ![]() | 0..* | Specimen | Sample for analysis | |
![]() ![]() ![]() | Σ | 1..1 | CodeableConcept | Kind of material that forms the specimen Binding: Excreta (required) |
![]() ![]() ![]() | Σ | 1..1 | Reference(Patient) | A reference from one resource to another |
![]() |
This structure is derived from Specimen
Name | Flags | Card. | Type | Description & Constraints![]() |
---|---|---|---|---|
![]() ![]() | 0..* | Specimen | Sample for analysis | |
![]() ![]() ![]() | S | 1..1 | CodeableConcept | Kind of material that forms the specimen Binding: Excreta (required) |
![]() ![]() ![]() | S | 1..1 | Reference(Patient) | A reference from one resource to another |
![]() |
This structure is derived from Specimen
Other representations of profile: CSV, Excel, Schematron
Path | Conformance | ValueSet |
Specimen.language | preferred | CommonLanguages Max Binding: AllLanguages |
Specimen.status | required | SpecimenStatus |
Specimen.type | required | Excreta |
Specimen.collection.method | example | FHIRSpecimenCollectionMethod |
Specimen.collection.bodySite | example | SNOMEDCTBodyStructures |
Specimen.collection.fastingStatus[x] | extensible | Hl7VSRelevantClincialInformation |
Specimen.processing.procedure | example | SpecimenProcessingProcedure |
Specimen.container.type | example | SpecimenContainerType |
Specimen.container.additive[x] | example | Hl7VSAdditivePreservative |
Specimen.condition | extensible | Hl7VSSpecimenCondition |